[mlpack-svn] [MLPACK] #354: I cannot build mlpack

Fri Jun 20 06:11:05 EDT 2014

#354: I cannot build mlpack
---------------------+------------------------------------------------------
  Reporter:  Shi     |        Owner:  birm    
      Type:  defect  |       Status:  reopened
  Priority:  major   |    Milestone:          
 Component:  mlpack  |   Resolution:          
  Keywords:          |     Blocking:          
Blocked By:          |  
---------------------+------------------------------------------------------
Changes (by Shi):

  * status:  closed => reopened
  * resolution:  fixed =>

Comment:

 Unfortunately, I found the remaining errors in the suggested "cmake -D
 BOOST_INCLUDEDIR=/usr/include/ ../" and "BOOST_ROOT=/usr/".

 ----
 /home/m/archive/mlpack-1.0.8/build# cmake -D
 Boost_INCLUDE_DIR=/usr/include/ ../
 -- The C compiler identification is GNU 4.8.2
 -- The CXX compiler identification is GNU 4.8.2
 -- Check for working C compiler: /usr/local/bin/gcc
 -- Check for working C compiler: /usr/local/bin/gcc -- works
 -- Detecting C compiler ABI info
 -- Detecting C compiler ABI info - done
 -- Check for working CXX compiler: /usr/local/bin/c++
 -- Check for working CXX compiler: /usr/local/bin/c++ -- works
 -- Detecting CXX compiler ABI info
 -- Detecting CXX compiler ABI info - done
 -- Found Armadillo: /usr/lib/libarmadillo.so (found suitable version
 "4.300.8", required is "3.6.0")
 CMake Warning at CMakeLists.txt:81 (message):
   This is a 64-bit system, but Armadillo was compiled without 64-bit index
   support.  Consider recompiling Armadillo with ARMA_64BIT_WORD to enable
   64-bit indices (large matrix support).  MLPACK will still work without
   ARMA_64BIT_WORD defined, but will not scale to matrices with more than 4
   billion elements.

 -- Found LibXml2: /usr/lib/x86_64-linux-gnu/libxml2.so (found suitable
 version "2.8.0", required is "2.6.0")
 -- Boost version: 1.49.0
 -- Found the following Boost libraries:
 --   program_options
 --   unit_test_framework
 -- Boost version: 1.49.0
 -- Found the following Boost libraries:
 --   random
 -- Found Subversion: /usr/bin/svn (found version "1.6.17")
 -- Found Doxygen: /usr/bin/doxygen (found version "1.8.1.2")
 -- Configuring done
 -- Generating done
 -- Build files have been written to: /home/m/archive/mlpack-1.0.8/build

 /home/m/archive/mlpack-1.0.8/build# make
 [  1%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/dists/discrete_distribution.cpp.o
 [  2%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/dists/gaussian_distribution.cpp.o
 [  3%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/kernels/epanechnikov_kernel.cpp.o
 [  4%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/kernels/pspectrum_string_kernel.cpp.o
 [  5%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/math/lin_alg.cpp.o
 [  6%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/math/random.cpp.o
 [  7%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/optimizers/aug_lagrangian/aug_lagrangian_test_functions.cpp.o
 [  8%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/optimizers/lbfgs/test_functions.cpp.o
 [  9%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/optimizers/sgd/test_function.cpp.o
 [ 10%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/tree/mrkd_statistic.cpp.o
 [ 11%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/util/cli.cpp.o
 [ 12%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/util/cli_deleter.cpp.o
 [ 13%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/util/log.cpp.o
 [ 14%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/util/option.cpp.o
 [ 15%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/util/prefixedoutstream.cpp.o
 [ 16%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/util/save_restore_utility.cpp.o
 [ 17%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/util/string_util.cpp.o
 [ 18%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/util/timers.cpp.o
 [ 19%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/util/version.cpp.o
 [ 20%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/methods/cf/cf.cpp.o
 In file included from
 /home/m/archive/mlpack-1.0.8/src/mlpack/../mlpack/methods/neighbor_search/neighbor_search.hpp:254:0,
                  from
 /home/m/archive/mlpack-1.0.8/src/mlpack/methods/cf/cf.hpp:29,
                  from
 /home/m/archive/mlpack-1.0.8/src/mlpack/methods/cf/cf.cpp:26:
 /home/m/archive/mlpack-1.0.8/src/mlpack/../mlpack/methods/neighbor_search/neighbor_search_impl.hpp:
 In instantiation of 'void mlpack::neighbor::NeighborSearch<SortPolicy,
 MetricType, TreeType>::Search(size_t, arma::Mat<long unsigned int>&,
 arma::mat&) [with SortPolicy = mlpack::neighbor::NearestNeighborSort;
 MetricType = mlpack::metric::LMetric<2, true>; TreeType =
 mlpack::tree::BinarySpaceTree<mlpack::bound::HRectBound<2>,
 mlpack::neighbor::NeighborSearchStat<mlpack::neighbor::NearestNeighborSort>,
 arma::Mat<double> >; size_t = long unsigned int; arma::mat =
 arma::Mat<double>]':
 /home/m/archive/mlpack-1.0.8/src/mlpack/methods/cf/cf.cpp:144:67:
 required from here
 /home/m/archive/mlpack-1.0.8/src/mlpack/../mlpack/methods/neighbor_search/neighbor_search_impl.hpp:205:10:
 ??: ???????? 'numPrunes' ?? [-Wunused-variable]
    size_t numPrunes = 0;
           ^
 [ 21%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/methods/det/dtree.cpp.o
 /home/m/archive/mlpack-1.0.8/src/mlpack/methods/det/dtree.cpp:143:6: ??:
 ??? 'maxLeafSize' ?????? [-Wunused-parameter]
  bool DTree::FindSplit(const arma::mat& data,
       ^
 [ 22%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/methods/det/dt_utils.cpp.o
 [ 23%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/methods/lars/lars.cpp.o
 [ 24%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/methods/linear_regression/linear_regression.cpp.o
 [ 25%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/methods/logistic_regression/logistic_regression_function.cpp.o
 [ 26%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/methods/neighbor_search/sort_policies/nearest_neighbor_sort.cpp.o
 [ 27%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/methods/neighbor_search/sort_policies/furthest_neighbor_sort.cpp.o
 [ 28%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/methods/neighbor_search/unmap.cpp.o
 [ 29%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/methods/pca/pca.cpp.o
 [ 29%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/methods/radical/radical.cpp.o
 Linking CXX shared library ../../lib/libmlpack.so
 Moving header files to include/mlpack/
 [ 29%] Built target mlpack
 [ 30%] Building CXX object
 src/mlpack/methods/sparse_coding/CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o
 Linking CXX executable ../../../../bin/sparse_coding
 CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o: In function
 `boost::program_options::validation_error::validation_error(boost::program_options::validation_error::kind_t,
 std::string const&, std::string const&, int)':
 sparse_coding_main.cpp:(.text._ZN5boost15program_options16validation_errorC2ENS1_6kind_tERKSsS4_i[_ZN5boost15program_options16validation_errorC5ENS1_6kind_tERKSsS4_i]+0x21):
 undefined reference to
 `boost::program_options::validation_error::get_template(boost::program_options::validation_error::kind_t)'
 sparse_coding_main.cpp:(.text._ZN5boost15program_options16validation_errorC2ENS1_6kind_tERKSsS4_i[_ZN5boost15program_options16validation_errorC5ENS1_6kind_tERKSsS4_i]+0x39):
 undefined reference to
 `boost::program_options::error_with_option_name::error_with_option_name(std::string
 const&, std::string const&, std::string const&, int)'
 CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o: In function
 `boost::program_options::error_with_option_name::~error_with_option_name()':
 sparse_coding_main.cpp:(.text._ZN5boost15program_options22error_with_option_nameD2Ev[_ZN5boost15program_options22error_with_option_nameD5Ev]+0x12):
 undefined reference to `vtable for
 boost::program_options::error_with_option_name'
 CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o: In function
 `boost::program_options::validation_error::~validation_error()':
 sparse_coding_main.cpp:(.text._ZN5boost15program_options16validation_errorD2Ev[_ZN5boost15program_options16validation_errorD5Ev]+0x12):
 undefined reference to `vtable for
 boost::program_options::error_with_option_name'
 CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o: In function
 `boost::program_options::invalid_option_value::~invalid_option_value()':
 sparse_coding_main.cpp:(.text._ZN5boost15program_options20invalid_option_valueD2Ev[_ZN5boost15program_options20invalid_option_valueD5Ev]+0x12):
 undefined reference to `vtable for
 boost::program_options::error_with_option_name'
 CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o: In function
 `boost::program_options::error_with_option_name::~error_with_option_name()':
 sparse_coding_main.cpp:(.text._ZN5boost15program_options22error_with_option_nameD0Ev[_ZN5boost15program_options22error_with_option_nameD0Ev]+0x12):
 undefined reference to `vtable for
 boost::program_options::error_with_option_name'
 CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o: In function
 `boost::program_options::validation_error::~validation_error()':
 sparse_coding_main.cpp:(.text._ZN5boost15program_options16validation_errorD0Ev[_ZN5boost15program_options16validation_errorD0Ev]+0x12):
 undefined reference to `vtable for
 boost::program_options::error_with_option_name'
 CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o:sparse_coding_main.cpp:(.text._ZN5boost15program_options20invalid_option_valueD0Ev[_ZN5boost15program_options20invalid_option_valueD0Ev]+0x12):
 more undefined references to `vtable for
 boost::program_options::error_with_option_name' follow
 CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o:(.rodata._ZTVN5boost16exception_detail19error_info_injectorINS_15program_options20invalid_option_valueEEE[_ZTVN5boost16exception_detail19error_info_injectorINS_15program_options20invalid_option_valueEEE]+0x20):
 undefined reference to
 `boost::program_options::error_with_option_name::what() const'
 CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o:(.rodata._ZTVN5boost16exception_detail19error_info_injectorINS_15program_options20invalid_option_valueEEE[_ZTVN5boost16exception_detail19error_info_injectorINS_15program_options20invalid_option_valueEEE]+0x30):
 undefined reference to
 `boost::program_options::error_with_option_name::substitute_placeholders(std::string
 const&) const'
 CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o:(.rodata._ZTVN5boost16exception_detail10clone_implINS0_19error_info_injectorINS_15program_options20invalid_option_valueEEEEE[_ZTVN5boost16exception_detail10clone_implINS0_19error_info_injectorINS_15program_options20invalid_option_valueEEEEE]+0x28):
 undefined reference to
 `boost::program_options::error_with_option_name::what() const'
 CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o:(.rodata._ZTVN5boost16exception_detail10clone_implINS0_19error_info_injectorINS_15program_options20invalid_option_valueEEEEE[_ZTVN5boost16exception_detail10clone_implINS0_19error_info_injectorINS_15program_options20invalid_option_valueEEEEE]+0x38):
 undefined reference to
 `boost::program_options::error_with_option_name::substitute_placeholders(std::string
 const&) const'
 CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o:(.rodata._ZTVN5boost16exception_detail19error_info_injectorINS_15program_options16validation_errorEEE[_ZTVN5boost16exception_detail19error_info_injectorINS_15program_options16validation_errorEEE]+0x20):
 undefined reference to
 `boost::program_options::error_with_option_name::what() const'
 CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o:(.rodata._ZTVN5boost16exception_detail19error_info_injectorINS_15program_options16validation_errorEEE[_ZTVN5boost16exception_detail19error_info_injectorINS_15program_options16validation_errorEEE]+0x30):
 undefined reference to
 `boost::program_options::error_with_option_name::substitute_placeholders(std::string
 const&) const'
 CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o:(.rodata._ZTVN5boost16exception_detail10clone_implINS0_19error_info_injectorINS_15program_options16validation_errorEEEEE[_ZTVN5boost16exception_detail10clone_implINS0_19error_info_injectorINS_15program_options16validation_errorEEEEE]+0x28):
 undefined reference to
 `boost::program_options::error_with_option_name::what() const'
 CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o:(.rodata._ZTVN5boost16exception_detail10clone_implINS0_19error_info_injectorINS_15program_options16validation_errorEEEEE[_ZTVN5boost16exception_detail10clone_implINS0_19error_info_injectorINS_15program_options16validation_errorEEEEE]+0x38):
 undefined reference to
 `boost::program_options::error_with_option_name::substitute_placeholders(std::string
 const&) const'
 CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o:(.rodata._ZTIN5boost15program_options16validation_errorE[_ZTIN5boost15program_options16validation_errorE]+0x10):
 undefined reference to `typeinfo for
 boost::program_options::error_with_option_name'
 CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o:(.rodata._ZTVN5boost15program_options16validation_errorE[_ZTVN5boost15program_options16validation_errorE]+0x20):
 undefined reference to
 `boost::program_options::error_with_option_name::what() const'
 CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o:(.rodata._ZTVN5boost15program_options16validation_errorE[_ZTVN5boost15program_options16validation_errorE]+0x30):
 undefined reference to
 `boost::program_options::error_with_option_name::substitute_placeholders(std::string
 const&) const'
 CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o:(.rodata._ZTVN5boost15program_options20invalid_option_valueE[_ZTVN5boost15program_options20invalid_option_valueE]+0x20):
 undefined reference to
 `boost::program_options::error_with_option_name::what() const'
 CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o:(.rodata._ZTVN5boost15program_options20invalid_option_valueE[_ZTVN5boost15program_options20invalid_option_valueE]+0x30):
 undefined reference to
 `boost::program_options::error_with_option_name::substitute_placeholders(std::string
 const&) const'
 ../../../../lib/libmlpack.so.1.0: undefined reference to
 `boost::program_options::detail::cmdline::get_canonical_option_prefix()'
 collect2: ???: ld ?????? 1 ???????
 make[2]: *** [bin/sparse_coding] Error 1
 make[1]: ***
 [src/mlpack/methods/sparse_coding/CMakeFiles/sparse_coding.dir/all] Error
 2
 make: *** [all] Error 2
 /home/m/archive/mlpack-1.0.8/build#

 ----------------------
 /home/m/archive/mlpack-1.0.8/build# cmake -D BOOST_ROOT=/usr/ ../
 -- The C compiler identification is GNU 4.8.2
 -- The CXX compiler identification is GNU 4.8.2
 -- Check for working C compiler: /usr/local/bin/gcc
 -- Check for working C compiler: /usr/local/bin/gcc -- works
 -- Detecting C compiler ABI info
 -- Detecting C compiler ABI info - done
 -- Check for working CXX compiler: /usr/local/bin/c++
 -- Check for working CXX compiler: /usr/local/bin/c++ -- works
 -- Detecting CXX compiler ABI info
 -- Detecting CXX compiler ABI info - done
 -- Found Armadillo: /usr/lib/libarmadillo.so (found suitable version
 "4.300.8", required is "3.6.0")
 CMake Warning at CMakeLists.txt:81 (message):
   This is a 64-bit system, but Armadillo was compiled without 64-bit index
   support.  Consider recompiling Armadillo with ARMA_64BIT_WORD to enable
   64-bit indices (large matrix support).  MLPACK will still work without
   ARMA_64BIT_WORD defined, but will not scale to matrices with more than 4
   billion elements.

 -- Found LibXml2: /usr/lib/x86_64-linux-gnu/libxml2.so (found suitable
 version "2.8.0", required is "2.6.0")
 -- Boost version: 1.49.0
 -- Found the following Boost libraries:
 --   program_options
 --   unit_test_framework
 -- Boost version: 1.49.0
 -- Found the following Boost libraries:
 --   random
 -- Found Subversion: /usr/bin/svn (found version "1.6.17")
 -- Found Doxygen: /usr/bin/doxygen (found version "1.8.1.2")
 -- Configuring done
 -- Generating done
 -- Build files have been written to: /home/m/archive/mlpack-1.0.8/build
 /home/m/archive/mlpack-1.0.8/build# fd
 /home/m/archive/mlpack-1.0.8/build# make
 Scanning dependencies of target mlpack
 [  1%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/dists/discrete_distribution.cpp.o
 [  2%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/dists/gaussian_distribution.cpp.o
 [  3%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/kernels/epanechnikov_kernel.cpp.o
 [  4%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/kernels/pspectrum_string_kernel.cpp.o
 [  5%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/math/lin_alg.cpp.o
 [  6%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/math/random.cpp.o
 [  7%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/optimizers/aug_lagrangian/aug_lagrangian_test_functions.cpp.o
 [  8%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/optimizers/lbfgs/test_functions.cpp.o
 [  9%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/optimizers/sgd/test_function.cpp.o
 [ 10%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/tree/mrkd_statistic.cpp.o
 [ 11%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/util/cli.cpp.o
 [ 12%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/util/cli_deleter.cpp.o
 [ 13%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/util/log.cpp.o
 [ 14%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/util/option.cpp.o
 [ 15%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/util/prefixedoutstream.cpp.o
 [ 16%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/util/save_restore_utility.cpp.o
 [ 17%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/util/string_util.cpp.o
 [ 18%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/util/timers.cpp.o
 [ 19%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/core/util/version.cpp.o
 [ 20%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/methods/cf/cf.cpp.o
 In file included from
 /home/m/archive/mlpack-1.0.8/src/mlpack/../mlpack/methods/neighbor_search/neighbor_search.hpp:254:0,
                  from
 /home/m/archive/mlpack-1.0.8/src/mlpack/methods/cf/cf.hpp:29,
                  from
 /home/m/archive/mlpack-1.0.8/src/mlpack/methods/cf/cf.cpp:26:
 /home/m/archive/mlpack-1.0.8/src/mlpack/../mlpack/methods/neighbor_search/neighbor_search_impl.hpp:
 In instantiation of 'void mlpack::neighbor::NeighborSearch<SortPolicy,
 MetricType, TreeType>::Search(size_t, arma::Mat<long unsigned int>&,
 arma::mat&) [with SortPolicy = mlpack::neighbor::NearestNeighborSort;
 MetricType = mlpack::metric::LMetric<2, true>; TreeType =
 mlpack::tree::BinarySpaceTree<mlpack::bound::HRectBound<2>,
 mlpack::neighbor::NeighborSearchStat<mlpack::neighbor::NearestNeighborSort>,
 arma::Mat<double> >; size_t = long unsigned int; arma::mat =
 arma::Mat<double>]':
 /home/m/archive/mlpack-1.0.8/src/mlpack/methods/cf/cf.cpp:144:67:
 required from here
 /home/m/archive/mlpack-1.0.8/src/mlpack/../mlpack/methods/neighbor_search/neighbor_search_impl.hpp:205:10:
 ??: ???????? 'numPrunes' ?? [-Wunused-variable]
    size_t numPrunes = 0;
           ^
 [ 21%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/methods/det/dtree.cpp.o
 /home/m/archive/mlpack-1.0.8/src/mlpack/methods/det/dtree.cpp:143:6: ??:
 ??? 'maxLeafSize' ?????? [-Wunused-parameter]
  bool DTree::FindSplit(const arma::mat& data,
       ^
 [ 22%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/methods/det/dt_utils.cpp.o
 [ 23%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/methods/lars/lars.cpp.o
 [ 24%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/methods/linear_regression/linear_regression.cpp.o
 [ 25%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/methods/logistic_regression/logistic_regression_function.cpp.o
 [ 26%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/methods/neighbor_search/sort_policies/nearest_neighbor_sort.cpp.o
 [ 27%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/methods/neighbor_search/sort_policies/furthest_neighbor_sort.cpp.o
 [ 28%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/methods/neighbor_search/unmap.cpp.o
 [ 29%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/methods/pca/pca.cpp.o
 [ 29%] Building CXX object
 src/mlpack/CMakeFiles/mlpack.dir/methods/radical/radical.cpp.o
 Linking CXX shared library ../../lib/libmlpack.so
 Moving header files to include/mlpack/
 [ 29%] Built target mlpack
 Scanning dependencies of target sparse_coding
 [ 30%] Building CXX object
 src/mlpack/methods/sparse_coding/CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o
 Linking CXX executable ../../../../bin/sparse_coding
 CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o: In function
 `boost::program_options::validation_error::validation_error(boost::program_options::validation_error::kind_t,
 std::string const&, std::string const&, int)':
 sparse_coding_main.cpp:(.text._ZN5boost15program_options16validation_errorC2ENS1_6kind_tERKSsS4_i[_ZN5boost15program_options16validation_errorC5ENS1_6kind_tERKSsS4_i]+0x21):
 undefined reference to
 `boost::program_options::validation_error::get_template(boost::program_options::validation_error::kind_t)'
 sparse_coding_main.cpp:(.text._ZN5boost15program_options16validation_errorC2ENS1_6kind_tERKSsS4_i[_ZN5boost15program_options16validation_errorC5ENS1_6kind_tERKSsS4_i]+0x39):
 undefined reference to
 `boost::program_options::error_with_option_name::error_with_option_name(std::string
 const&, std::string const&, std::string const&, int)'
 CMakeFiles/sparse_coding.dir/sparse_coding_main.cpp.o: In function
 `boost::program_options::error_with_option_name::~error_with_option_name()':
 sparse_coding_main.cpp:(.text._ZN5boost15program_options22error_with_option_nameD2Ev[_ZN5boost15program_options22error_with_option_nameD5Ev]+0x12):
 undefined reference to `vtable for
 boost::program_options::error_with_option_name'
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 //ADVANCED property for variable: DOXYGEN_EXECUTABLE
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 -----------------------------------------------------------------
 CMakeCache-BOOSTROOT.txt

 # This is the CMakeCache file.
 # For build in directory: /home/m/archive/mlpack-1.0.8/build
 # It was generated by CMake: /usr/bin/cmake
 # You can edit this file to change values found and used by cmake.
 # If you do not want to change any of the values, simply exit the editor.
 # If you do want to change a value, simply edit, save, and exit the
 editor.
 # The syntax for the file is as follows:
 # KEY:TYPE=VALUE
 # KEY is the name of a variable in the cache.
 # TYPE is a hint to GUI's for the type of VALUE, DO NOT EDIT TYPE!.
 # VALUE is the current value for the KEY.

 ########################
 # EXTERNAL cache entries
 ########################

 //Path to a file.
 ARMADILLO_INCLUDE_DIR:PATH=/usr/include

 //Path to a library.
 ARMADILLO_LIBRARY:FILEPATH=/usr/lib/libarmadillo.so

 //Compile with extra Armadillo debugging symbols.
 ARMA_EXTRA_DEBUG:BOOL=OFF

 //No help, variable specified on the command line.
 BOOST_ROOT:UNINITIALIZED=/usr/

 //The directory containing a CMake configuration file for Boost.
 Boost_DIR:PATH=Boost_DIR-NOTFOUND

 //Path to a file.
 Boost_INCLUDE_DIR:PATH=/usr/include

 //Boost library directory
 Boost_LIBRARY_DIRS:FILEPATH=/usr/lib

 //The Boost PROGRAM_OPTIONS library
 Boost_PROGRAM_OPTIONS_LIBRARY:FILEPATH=/usr/lib/libboost_program_options-
 mt.so

 //Boost program_options library (debug)
 Boost_PROGRAM_OPTIONS_LIBRARY_DEBUG:FILEPATH=/usr/lib
 /libboost_program_options-mt.so

 //Boost program_options library (release)
 Boost_PROGRAM_OPTIONS_LIBRARY_RELEASE:FILEPATH=/usr/lib
 /libboost_program_options-mt.so

 //The Boost RANDOM library
 Boost_RANDOM_LIBRARY:FILEPATH=/usr/lib/libboost_random-mt.so

 //Boost random library (debug)
 Boost_RANDOM_LIBRARY_DEBUG:FILEPATH=/usr/lib/libboost_random-mt.so

 //Boost random library (release)
 Boost_RANDOM_LIBRARY_RELEASE:FILEPATH=/usr/lib/libboost_random-mt.so

 //The Boost UNIT_TEST_FRAMEWORK library
 Boost_UNIT_TEST_FRAMEWORK_LIBRARY:FILEPATH=/usr/lib
 /libboost_unit_test_framework-mt.so

 //Boost unit_test_framework library (debug)
 Boost_UNIT_TEST_FRAMEWORK_LIBRARY_DEBUG:FILEPATH=/usr/lib
 /libboost_unit_test_framework-mt.so

 //Boost unit_test_framework library (release)
 Boost_UNIT_TEST_FRAMEWORK_LIBRARY_RELEASE:FILEPATH=/usr/lib
 /libboost_unit_test_framework-mt.so