[mlpack-git] [mlpack/mlpack] add overload that imputes every dimensions (#740)
Tham
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Wed Jul 27 13:31:54 EDT 2016
> + DatasetMapper<MissingPolicy>,
> + CustomImputation<double>> allImputer(allInfo, allCustomStrategy);
> + // convert a or nan to 99 for all dimensions.
> + allImputer.Impute(allInput, "a");
> +
> + // Custom imputation result check
> + BOOST_REQUIRE_CLOSE(allInput(0, 0), 99.0, 1e-5);
> + BOOST_REQUIRE_CLOSE(allInput(0, 1), 5.0, 1e-5);
> + BOOST_REQUIRE_CLOSE(allInput(0, 2), 8.0, 1e-5);
> + BOOST_REQUIRE_CLOSE(allInput(1, 0), 2.0, 1e-5);
> + BOOST_REQUIRE_CLOSE(allInput(1, 1), 6.0, 1e-5);
> + BOOST_REQUIRE_CLOSE(allInput(1, 2), 9.0, 1e-5);
> + BOOST_REQUIRE_CLOSE(allInput(2, 0), 3.0, 1e-5);
> + BOOST_REQUIRE_CLOSE(allInput(2, 1), 99.0, 1e-5);
> + BOOST_REQUIRE_CLOSE(allInput(2, 2), 10.0, 1e-5);
> +
Hi, Keon, I think we should do the test on rowMajor data too.
```
// Now, try impute() overload with all dimensions.
arma::mat allInputColumnWise;
MissingPolicy allPolicy({"a"});
DatasetMapper<MissingPolicy> allInfo(allPolicy);
BOOST_REQUIRE(data::Load("test_file.csv", allInputColumnWise, allInfo) == true);
arma::mat allInputRowWise = allInputColumnWise;
// convert missing vals to 99.
CustomImputation<double> allCustomStrategy(99);
Imputer<double,
DatasetMapper<MissingPolicy>,
CustomImputation<double>> allImputer(allInfo, allCustomStrategy);
// convert a or nan to 99 for all dimensions.
allImputer.Impute(allInputColumnWise, "a");
allImputer.ColumnMajor() = true; //I add a new function to access ColumnMajor
allImputer.Impute(allInputRowWise, "a");
// Custom imputation result check
auto requireClose = [](arma::mat const &input)
{
BOOST_REQUIRE_CLOSE(input(0, 0), 99.0, 1e-5);
BOOST_REQUIRE_CLOSE(input(0, 1), 5.0, 1e-5);
BOOST_REQUIRE_CLOSE(input(0, 2), 8.0, 1e-5);
BOOST_REQUIRE_CLOSE(input(1, 0), 2.0, 1e-5);
BOOST_REQUIRE_CLOSE(input(1, 1), 6.0, 1e-5);
BOOST_REQUIRE_CLOSE(input(1, 2), 9.0, 1e-5);
BOOST_REQUIRE_CLOSE(input(2, 0), 3.0, 1e-5);
BOOST_REQUIRE_CLOSE(input(2, 1), 99.0, 1e-5);
BOOST_REQUIRE_CLOSE(input(2, 2), 10.0, 1e-5);
};
requireClose(allInputColumnWise);
requireClose(allInputRowWise);
```
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